From 306538769da41e6f2f93f732bd551bc5c2b25a60 Mon Sep 17 00:00:00 2001
From: Monica J Emerson <monj@dtu.dk>
Date: Tue, 19 Jan 2021 11:31:21 +0100
Subject: [PATCH] Added control samples as a condition for the lung. Diseases
--> Conditions
---
code/image_preprocessing.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/code/image_preprocessing.py b/code/image_preprocessing.py
index 5dadfec..266b431 100755
--- a/code/image_preprocessing.py
+++ b/code/image_preprocessing.py
@@ -115,7 +115,7 @@ for ind_c,std_list_condition in enumerate(std_list):
plt.show()
#Average intesity-spread across al image channels
-mean_std = sum(std_list)/len(std_list)
+mean_std = sum(std_list_flat)/len(std_list_flat)
print('The average spread of an image channel is ' + str(round(mean_std)))
#%% Correct intensities
--
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