diff --git a/README.md b/README.md index 0d9df4b8b73f688f99a7bf6d7f0b46b1487fdef4..627a6fb1a432c94b5cf383632c86755067d25a56 100644 --- a/README.md +++ b/README.md @@ -1,12 +1,14 @@ # Feature statistics -To be edited +To reproduce the results from our paper (link to come), you will need to clone this repository or download it as a .zip file. Then, download the input_data and results_justDictionaries folders from DTU Data at XX. Place both within the Lung_ECM folder, besides the code folder. Rename 'results_justDictionaries' to 'results' so as to reproduce the exact results from our paper. Under the same DTU Data link you will also find the complete set of results under 'results_complete'. + +The following figure is a schematic view of the code, results and input_data folders. The table below describes further the content of the code folder found in this repository. Code contains: | File name | Description | Input | Output | | --------- | ----------- | ----- | ------ | -| lung_to_lif.py | Used to transform data acquired with a Leica microscope into a format we can work with | EDIT | data_corrected_bis | +| lung_to_lif.py | Used to transform data acquired with a Leica microscope into a format we can work with | EDIT | input_data/raw | -nogenerate data_corrected_bis, where each 3D scan is stored as a sequence of .png files under a folder with 'frame' as prefix. \ No newline at end of file +nogenerate data_corrected_bis, where each 3D scan is stored as a sequence of .png files under a folder with 'frame' as prefix.