From 0402a140a5541bb5253d94daf03d0df97e5a48da Mon Sep 17 00:00:00 2001
From: Felipe <fima@dtu.dk>
Date: Mon, 24 Feb 2025 15:27:19 +0100
Subject: [PATCH] imports fix
---
qim3d/io/__init__.py | 6 +++---
qim3d/io/_convert.py | 7 ++++---
2 files changed, 7 insertions(+), 6 deletions(-)
diff --git a/qim3d/io/__init__.py b/qim3d/io/__init__.py
index 23f02d4c..db64b581 100644
--- a/qim3d/io/__init__.py
+++ b/qim3d/io/__init__.py
@@ -1,6 +1,6 @@
# from ._sync import Sync # this will be added back after future development
-from ._convert import convert
-from ._downloader import Downloader
from ._loading import load, load_mesh
-from ._ome_zarr import export_ome_zarr, import_ome_zarr
+from ._downloader import Downloader
from ._saving import save, save_mesh
+from ._convert import convert
+from ._ome_zarr import export_ome_zarr, import_ome_zarr
diff --git a/qim3d/io/_convert.py b/qim3d/io/_convert.py
index 49d2633f..fbfe75a9 100644
--- a/qim3d/io/_convert.py
+++ b/qim3d/io/_convert.py
@@ -7,9 +7,10 @@ import numpy as np
import tifffile as tiff
import zarr
import zarr.core
+import qim3d
+
from tqdm import tqdm
-from qim3d.io import save
from qim3d.utils._misc import stringify_path
@@ -121,7 +122,7 @@ class Convert:
"""
z = zarr.open(zarr_path)
- save(tif_path, z)
+ qim3d.io.save(tif_path, z)
def convert_nifti_to_zarr(self, nifti_path: str, zarr_path: str) -> zarr.core.Array:
"""
@@ -173,7 +174,7 @@ class Convert:
"""
z = zarr.open(zarr_path)
- save(nifti_path, z, compression=compression)
+ qim3d.io.save(nifti_path, z, compression=compression)
def convert(
--
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