diff --git a/requirements.txt b/requirements.txt index 320d02f35762b99ebf4234db6f9095ac3444e68e..7ec31e7cb5fa53cc6ada37eccbe79fbce9f4b1c2 100644 --- a/requirements.txt +++ b/requirements.txt @@ -12,8 +12,8 @@ scipy>=1.11.2 seaborn>=0.12.2 pydicom==2.4.4 setuptools>=68.0.0 -imagecodecs==2023.7.10 -tifffile==2023.8.12 +imagecodecs>=2024.12.30 +tifffile>=2025.1.10 torch>=2.0.1 torchvision>=0.15.2 torchinfo>=1.8.0 diff --git a/setup.py b/setup.py index 9ca17db39b53bd3ef7e76bfb239da4b9d44ef2dd..883da55c9b9caa42d808ee75874f58a24e341b9c 100644 --- a/setup.py +++ b/setup.py @@ -44,42 +44,45 @@ setup( ], python_requires='>=3.10', install_requires=[ - 'gradio==4.44', - 'h5py>=3.9.0', - 'localthickness>=0.1.2', - 'matplotlib>=3.8.0', - 'pydicom==2.4.4', - 'numpy>=1.26.0', - 'outputformat>=0.1.3', - 'Pillow>=10.0.1', - 'plotly>=5.14.1', - 'scipy>=1.11.2', - 'seaborn>=0.12.2', - 'setuptools>=68.0.0', - 'tifffile==2023.8.12', - 'imagecodecs==2023.7.10', - 'tqdm>=4.65.0', - 'nibabel>=5.2.0', - 'ipywidgets>=8.1.2', - 'dask>=2023.6.0', - 'k3d>=2.16.1', - 'olefile>=0.46', - 'psutil>=5.9.0', - 'structure-tensor>=0.2.1', - 'noise>=1.2.2', - 'zarr>=2.18.2', - 'ome_zarr>=0.9.0', - 'dask-image>=2024.5.3', - 'scikit-image>=0.24.0', - 'trimesh>=4.4.9', + "gradio==4.44", + "h5py>=3.9.0", + "localthickness>=0.1.2", + "matplotlib>=3.8.0", + "pydicom==2.4.4", + "numpy>=1.26.0", + "outputformat>=0.1.3", + "Pillow>=10.0.1", + "plotly>=5.14.1", + "scipy>=1.11.2", + "seaborn>=0.12.2", + "setuptools>=68.0.0", + "tifffile>=2025.1.10", + "imagecodecs>=2024.12.30", + "tqdm>=4.65.0", + "nibabel>=5.2.0", + "ipywidgets>=8.1.2", + "dask>=2023.6.0", + "k3d>=2.16.1", + "olefile>=0.46", + "psutil>=5.9.0", + "structure-tensor>=0.2.1", + "noise>=1.2.2", + "zarr>=2.18.2", + "ome_zarr>=0.9.0", + "dask-image>=2024.5.3", + "scikit-image>=0.24.0", + "trimesh>=4.4.9" ], extras_require={ - 'deep-learning': [ - 'albumentations>=1.3.1', - 'torch>=2.0.1', - 'torchvision>=0.15.2', - 'torchinfo>=1.8.0', - 'monai>=1.2.0', - ] - }, + "deep-learning": [ + "albumentations>=1.3.1", + "torch>=2.0.1", + "torchvision>=0.15.2", + "torchinfo>=1.8.0", + "monai>=1.2.0", + ], + 'test': [ + 'testbook>=0.4.2' + ] +} )