From ad886118176238141c28485c216e1a877a4ff80a Mon Sep 17 00:00:00 2001
From: Christian Kento Rasmussen <christian.kento@gmail.com>
Date: Fri, 14 Jun 2024 15:18:39 +0200
Subject: [PATCH] fixed bug
---
qim3d/io/convert.py | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/qim3d/io/convert.py b/qim3d/io/convert.py
index 2e18a23a..f2af9e6b 100644
--- a/qim3d/io/convert.py
+++ b/qim3d/io/convert.py
@@ -50,7 +50,7 @@ class Convert:
case (".zarr", ".nii"):
return self.convert_zarr_to_nifti(input_path, output_path)
case (".zarr", ".nii.gz"):
- return self.convert_zarr_to_nifti(input_path, output_path, compress=True)
+ return self.convert_zarr_to_nifti(input_path, output_path, compression=True)
case _:
raise ValueError("Unsupported file format")
# Fail
@@ -139,7 +139,7 @@ class Convert:
return z
- def convert_zarr_to_nifti(self, zarr_path, nifti_path, compress=False):
+ def convert_zarr_to_nifti(self, zarr_path, nifti_path, compression=False):
"""Convert a zarr file to a nifti file
Args:
@@ -150,7 +150,7 @@ class Convert:
None
"""
z = zarr.open(zarr_path)
- save(nifti_path, z, compress=compress)
+ save(nifti_path, z, compression=compression)
def convert(input_path: str, output_path: str, chunk_shape: tuple = (64, 64, 64)):
--
GitLab