--- hide: - navigation --- # Release History [](https://badge.fury.io/py/qim3d) [](https://pepy.tech/project/qim3d) Below, you'll find details about the version history of `qim3d`. Remember to keep your pip installation [up to date](../../index.md/#get-the-latest-version) so that you have the latest features! ### v1.0.0 (21/01/2025) - First stable release of the library, with significant refactoring. - Layout and organizational update for the documentation. - Additional coverage for unit tests. ### v0.4.5 (21/11/2024) - Updated Layer surface segmentation GUI - Sphericity as feature from volumes - Colorbar for visualization functions - Chunk visualization tool - Histogram visualization ### v0.4.4 (11/10/2024) - Introduction of `itk-vtk-viewer` for OME-Zarr data visualization 🎉  ### v0.4.3 (02/10/2024) - Updated requirements - Introduction of mesh generation, visualization, saving and loading 🎉  ### v0.4.2 (30/09/2024) - Export and import is now possible in the OME-Zarr standard, including multi-scale datasets. - Filters now have the option to use Dask when available  ### v0.4.1 (30/07/2024) - Fixed issue with example volumes not being loaded ### v0.4.0 (29/07/2024) - Refactored imports to use lazy loading - Namespace `utils` reserved for internal tools only - All deep-learning related functions moved to `models` - Running `pip install qim3d` does not install DL requirements. For those, use `pip install qim3d['deep-learning']` ### v0.3.9 (24/07/2024) - Loading and saving for Zarr files - File convertion using the CLI, including Zarr - Refactoring for the GUIs - Color visualization for structure tensor  - Refactoring for synthetic data generation, from `utils` to `generate` - Introduction of `qim3d.generate.collection` 🎉  ### v0.3.8 (20/06/2024) - Minor refactoring and bug fixes ### v0.3.7 (17/06/2024) - Performance improvements when importing - Refactoring for blob detection  ### v0.3.6 (30/05/2024) - Refactoring for performance improvement - Welcome message for the CLI - Introduction of `qim3d.processing.fade_mask` 🎉  ### v0.3.5 (27/05/2024) - Added runtime and memory usage in the documentation - Introduction of `qim3d.utils.generate_volume` 🎉  - CLI refactoring, adding welcome message to the user  - Introduction of `preview` CLI 🎉 ### v0.3.4 (22/05/2024) - Documentation for `qim3d.viz.plot_cc` - Fixed issue with Annotation tool and recent Gradio versions - New colormap: `qim3d.viz.colormaps.qim`, showcasing the Qim colors! - Object separation using `qim3d.processing.operations.watershed` - Added option to pass `dim_order` to `vol/vgi` files - The 'Data Explorer' GUI now can load image sequences also - Warning in case user tries to load a file larger than available memory - Objects colormap now can enforce a `min_dist` between neighbor colors - It is possible to load a directory with a sequence of PIL images - Aspect ratio issue for k3d fixed ### v0.3.3 (11/04/2024) - Introduction of `qim3d.viz.slicer` (and also `qim3d.viz.orthogonal` ) 🎉 - Introduction of `qim3d.gui.annotation_tool` 🎉 - Introduction of `qim3d.processing.Blob` for blob detection 🎉 - Introduction of `qim3d.processing.local_thickness` 🎉 - Introduction of `qim3d.processing.structure_tensor` 🎉 - Support for loading DICOM files with `qim3d.io.load` - Introduction of `qim3d.processing.get_3d_cc` for 3D connected components and `qim3d.viz.plot_cc` for associated visualization 🎉 - Introduction of `qim3d.viz.colormaps` for easy visualization of e.g. multi-label segmentation results 🎉 - Introduction of `qim3d.processing.operations.background_removal` 🎉 - Documentation refactoring - Fixed bug preventing `Data Explorer` to show files ### v0.3.2 (23/02/2024) This version focus on the increased usability of the `qim3d` library - Online documentation available at [https://platform.qim.dk/qim3d](https://platform.qim.dk/qim3d) - Virtual stacks also available for `txm` files - Updated GUI launch pipeline - New functionalities for `qim3d.viz.slices_grid` - Introduction of `qim3d.processing.filters` 🎉 - Introduction of `qim3d.viz.vol` 🎉 ### v0.3.1 (01/02/2024) Release expanding the IO functionalities - Support for loading `vol` `nii` and `bigtiff` files - Data loader now supports `virtual_stack` - Save functionality for all file formats except `txm` ### v0.3.0 (23/01/2024) - Introduction of qim3d CLI 🎉 - Introduction of memory utils 🎉 - Data Explorer GUI - Save functionality for `tif` files ### v0.2.0 (18/09/2023) Includes new develoments toward the usability of the library, as well as its integration with the QIM platform. - Refactored code for the graphical interfaces - For the local thicknes GUI, now it is possible to pass and receive numpy arrays instead of using the upload functionality. - Improved data loader - Now the extensions `tif`, `h5` and `txm` are supported. - Added `qim3d.viz.slices_grid` for easy slice visualization. - U-net model creation - Model availabe from `qim3d.models.UNet` - Data augmentation class at `qim3d.utils.Augmentation` - Notebook with full pipeline at `docs/notebooks/Unet.ipynb` - Image examples accessible from `qim3d.examples` ### v0.1.3 (17/05/2023) First stable release. - Simple Tiff data loader - Graphical interfaces - Local thickness - 3D Isosurfaces - Data exploration tool