## #---------------------------------------------------------------- ## # These packages must be installed ## install.packages("Rcpp") ## install.packages("R6") ## install.packages("splines") ## install.packages("digest") ## # cpp matrix library ## install.packages("RcppArmadillo") ## # For develop install ## install.packages("devtools", type="source") ## install.packages("roxygen2") ## # For testing and building vignettes ## install.packages("rmarkdown") ## install.packages("R.rsp") ## install.packages("data.table") ## install.packages("plotly") ## install.packages("pbs") ## install.packages("V8") #---------------------------------------------------------------- # Go library(devtools) library(roxygen2) # Load the package directly ## document() ## pack <- as.package("../onlineforecast") ## load_all(pack) # ---------------------------------------------------------------- # Misc # # Add new vignette # Don't use name of existing file, it will overwrite! usethis::use_vignette("model-selection") # ---------------------------------------------------------------- # Running tests in folder "tests/testthat/" # # https://kbroman.org/pkg_primer/pages/tests.html # http://r-pkgs.had.co.nz/tests.html # # Initialize first time the the testing framework # use_testthat() # Init new test #use_test("newtest") # # Run all tests document() test() # # Run the examples load_all(as.package("../onlineforecast")) run_examples() # # Run tests in a single file # test_file("tests/testthat/test-rls-heat-load.R") # ---------------------------------------------------------------- # The version (move the value from DESCRIPTION to other places, so only update it in DESCRIPTION) txt <- scan("DESCRIPTION", character()) (ver <- txt[which(txt == "Version:") + 1]) # Not needed to write elsewhere now # ---------------------------------------------------------------- # Build the package document() # Run the "vignettes/make.R" to build a cache build(".", vignettes=TRUE) # The file gzfile <- paste0("../onlineforecast_",ver,".tar.gz") # Install it #install.packages(gzfile) #library(onlineforecast) # ---------------------------------------------------------------- # ---------------------------------------------------------------- # Build binary package #system(paste0("R CMD INSTALL --build ",gzfile)) # ---------------------------------------------------------------- # ---------------------------------------------------------------- # Test before release # Online, receive email (builds again, so when ok, then build the package file again above before submit!) devtools::check_win_devel() # Check the build locally devtools::check_built(gzfile) # Does give different results than check() above #system(paste0("R CMD check --as-cran ",gzfile)) system(paste0("R CMD check --as-cran ",gzfile)) unlink("onlineforecast.Rcheck/", recursive=TRUE) # Use for more checking: # https://docs.r-hub.io/ #----------------- # Use Rcpp and RcppArmadillo (2022-05): Some problem (segmentation fault) occured, something (Rostream...) was added to the 'src/RcppExports.cpp' file, however in some weird way it disappeared again! # # Update if new functions are added to the src folder #Rcpp::compileAttributes() # New package from scratch, see what is generated and correct that in the current package #library(RcppArmadillo) #RcppArmadillo.package.skeleton("onlineforecast", path = "~/tmp/") # on WINDOWS: # Install rtools # Run in R: #writeLines('PATH="${RTOOLS40_HOME}\\usr\\bin;${PATH}"', con = "~/.Renviron") # Restart R and check if rtools are found: #Sys.which("make") #----------------- # Run another version of R (a linux in podman) # see https://hub.docker.com/u/rocker # Open terminal and "sudo su" (needed for podman to access files) # Run "podman run --rm -d -p 8787:8787 -e ROOT=TRUE -e PASSWORD=pw -v $(pwd):/home/rstudio rocker/rstudio" # In browser go to "localhost:8787" # login: rstudio and pw # Open make.R # Set working directory to this files directory # Run installation of packages # Make a cup of coffee # Go to terminal and run: # "sudo apt-get install xml2 qpdf texlive" # Other versions with # "podman run --rm -p 8787:8787 -e PASSWORD=pw -v /home/pbac/g:/home/rstudio/g rocker/rstudio:3.6.1" # ---------------------------------------------------------------- # OLD, not exporting everything anymore # # Update NAMESPACE, use this function to export all functions! (with @export, but S3methods (e.g. print.lm) will not get exported, so change it to export) ## docit <- function(){ ## document() ## # Read ## nm <- "NAMESPACE" ## x <- scan(nm, what="character", sep="\n",blank.lines.skip=FALSE) ## # Manipulate x ## for(i in 1:length(x)){ ## if(length(grep("^S3method", x[i])) > 0){ ## x[i] <- gsub(",",".",gsub("S3method", "export", x[i])) ## } ## } ## # ## write(x, nm) ## } ## docit()