From 971af254abdcdd06c49850031510da7cbd141e45 Mon Sep 17 00:00:00 2001
From: Tue Herlau <tuhe@dtu.dk>
Date: Sun, 5 Sep 2021 15:02:48 +0200
Subject: [PATCH] Refactor dir snip
---
dist/codesnipper-0.0.2-py3-none-any.whl | Bin 0 -> 14584 bytes
dist/codesnipper-0.0.2.tar.gz | Bin 0 -> 13342 bytes
docs/build_docs.py | 8 +-
.../load_references.cpython-38.pyc | Bin
examples/block_processor.py | 63 +++++++
{example => examples}/citations.py | 0
examples/cs101_instructor/homework1.py | 20 +++
{example => examples}/exercise1.py | 0
{example => examples}/latex/br.pdf | Bin
{example => examples}/latex/index.aux | 0
{example => examples}/latex/index.bbl | 0
{example => examples}/latex/index.blg | 0
{example => examples}/latex/index.log | 0
{example => examples}/latex/index.out | 0
{example => examples}/latex/index.pdf | Bin
{example => examples}/latex/index.synctex.gz | Bin
{example => examples}/latex/index.tex | 0
{example => examples}/latex/library.bib | 0
{example => examples}/load_references.py | 2 +-
{example => examples}/output/citations.py | 0
.../output/load_references_a.py | 2 +-
.../output/load_references_b.py | 0
examples/process_cs101.py | 25 +++
src/codesnipper.egg-info/PKG-INFO | 158 +++++++++++++++++-
src/codesnipper.egg-info/SOURCES.txt | 5 +-
src/codesnipper.egg-info/requires.txt | 4 +-
.../__pycache__/citations.cpython-38.pyc | Bin 5040 -> 0 bytes
src/snipper/__pycache__/fix_s.cpython-38.pyc | Bin 3629 -> 3728 bytes
src/snipper/block_parsing.py | 78 +++++++++
src/snipper/fix_bf.py | 0
src/snipper/fix_cite.py | 65 +++----
src/snipper/fix_s.py | 105 +-----------
.../{citations.py => load_citations.py} | 0
src/snipper/snip_dir.py | 10 +-
src/snipper/snipper_main.py | 1 -
35 files changed, 399 insertions(+), 147 deletions(-)
create mode 100644 dist/codesnipper-0.0.2-py3-none-any.whl
create mode 100644 dist/codesnipper-0.0.2.tar.gz
rename {example => examples}/__pycache__/load_references.cpython-38.pyc (100%)
create mode 100644 examples/block_processor.py
rename {example => examples}/citations.py (100%)
create mode 100644 examples/cs101_instructor/homework1.py
rename {example => examples}/exercise1.py (100%)
rename {example => examples}/latex/br.pdf (100%)
rename {example => examples}/latex/index.aux (100%)
rename {example => examples}/latex/index.bbl (100%)
rename {example => examples}/latex/index.blg (100%)
rename {example => examples}/latex/index.log (100%)
rename {example => examples}/latex/index.out (100%)
rename {example => examples}/latex/index.pdf (100%)
rename {example => examples}/latex/index.synctex.gz (100%)
rename {example => examples}/latex/index.tex (100%)
rename {example => examples}/latex/library.bib (100%)
rename {example => examples}/load_references.py (93%)
rename {example => examples}/output/citations.py (100%)
rename {example => examples}/output/load_references_a.py (71%)
rename {example => examples}/output/load_references_b.py (100%)
create mode 100644 examples/process_cs101.py
delete mode 100644 src/snipper/__pycache__/citations.cpython-38.pyc
create mode 100644 src/snipper/block_parsing.py
create mode 100644 src/snipper/fix_bf.py
rename src/snipper/{citations.py => load_citations.py} (100%)
diff --git a/dist/codesnipper-0.0.2-py3-none-any.whl b/dist/codesnipper-0.0.2-py3-none-any.whl
new file mode 100644
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HcmV?d00001
diff --git a/docs/build_docs.py b/docs/build_docs.py
index 02f7791..46e7a45 100644
--- a/docs/build_docs.py
+++ b/docs/build_docs.py
@@ -20,10 +20,8 @@ if __name__ == "__main__":
from snipper.fix_s import save_s
from snipper.snipper_main import censor_file
-
- #
- # EX_BASE = "../examples"
- # np = EX_BASE + "/new_project"
+ EX_BASE = "../examples"
+ np = EX_BASE + "/latex"
# if os.path.isdir(np):
# shutil.rmtree(np)
@@ -40,7 +38,7 @@ if __name__ == "__main__":
# my_nup(np + "/index.pdf")
# my_nup(f"{np_basic1}/index.pdf")
#
- # # convert.pdf2png(np + "/index.pdf", "./index0.png")
+ convert.pdf2png(np + "/index.pdf", "./index.png", scale_to=600)
# output = np +"/index_2up.pdf"
#
# data = {}
diff --git a/example/__pycache__/load_references.cpython-38.pyc b/examples/__pycache__/load_references.cpython-38.pyc
similarity index 100%
rename from example/__pycache__/load_references.cpython-38.pyc
rename to examples/__pycache__/load_references.cpython-38.pyc
diff --git a/examples/block_processor.py b/examples/block_processor.py
new file mode 100644
index 0000000..c8662f7
--- /dev/null
+++ b/examples/block_processor.py
@@ -0,0 +1,63 @@
+from snipper.fix_s import get_s #!s
+from snipper.block_parsing import block_split
+import textwrap
+import numpy as np
+
+# Implement a sieve here.
+def primes_sieve(limit):
+ limitn = limit+1 #!b
+ primes = range(2, limitn)
+
+ for i in primes:
+ factors = list(range(i, limitn, i))
+ for f in factors[1:]:
+ if f in primes:
+ primes.remove(f)
+ return primes #!b
+#!s
+
+def obscure(blk, fun):
+ blok = block_split(blk, "#!b")
+ lines2 = blok['first'] + fun(blok['block']) + blok['last']
+ s = '\n'.join(lines2)
+ print(s)
+ return s
+
+# driver program
+if __name__ == '__main__':
+ with open(__file__, 'r') as f:
+ s = f.read().splitlines()
+ blk = get_s(s)['']
+
+ def cmnt(lines):
+ whitespace = " " * (len(lines[0]) - len(lines[0].lstrip()))
+ lines = textwrap.dedent("\n".join(lines)).splitlines()
+ lines = ["# " + l for l in lines]
+ return lines, whitespace
+
+ def f1(lines):
+ lines, whitespace = cmnt(lines)
+ lines = [lines[i] for i in np.random.permutation(len(lines))]
+ lines = textwrap.indent("\n".join(lines), whitespace).splitlines()
+ return lines
+
+ obscure(blk, f1)
+
+ def f2(lines):
+ lines, whitespace = cmnt(lines)
+ kp = """#'"[](){},.+-012345679:="""
+ l2 = []
+ for line in lines:
+ line2 = []
+ for w in line.split(' '):
+ if w in ['', 'return', 'if', 'else' '=', '#', "for", "in"]:
+ line2.append(w)
+ else:
+ w2 = "".join( [ (t if t in kp else '?') for t in w] )
+ line2.append(w2)
+ l2.append(" ".join(line2))
+ lines = l2
+ lines = textwrap.indent("\n".join(lines), whitespace).splitlines()
+ return lines
+
+ obscure(blk, f2)
diff --git a/example/citations.py b/examples/citations.py
similarity index 100%
rename from example/citations.py
rename to examples/citations.py
diff --git a/examples/cs101_instructor/homework1.py b/examples/cs101_instructor/homework1.py
new file mode 100644
index 0000000..49ed989
--- /dev/null
+++ b/examples/cs101_instructor/homework1.py
@@ -0,0 +1,20 @@
+def myfun(): #!s
+ """
+ Simple aux references \ref{eq1} in \ref{sec1}.
+ Simple bibtex citations: \cite{bertsekasII} and \cite[Somewhere around the middle]{herlau}
+
+ Example of custom command (reference notes)
+ > \nref{fig1}
+
+ Other example of custom command (reference assignment)
+ > \aref2{sec1}
+ """
+ print("See \\ref{sec1}") # Also works.
+ return 42 #!s
+
+def fun1(l1, l2):
+ s1 = sum(l1) #!s
+ s2 = sum(l2)
+ print("Hello worlds!") #!s
+ return s1 + s2
+
diff --git a/example/exercise1.py b/examples/exercise1.py
similarity index 100%
rename from example/exercise1.py
rename to examples/exercise1.py
diff --git a/example/latex/br.pdf b/examples/latex/br.pdf
similarity index 100%
rename from example/latex/br.pdf
rename to examples/latex/br.pdf
diff --git a/example/latex/index.aux b/examples/latex/index.aux
similarity index 100%
rename from example/latex/index.aux
rename to examples/latex/index.aux
diff --git a/example/latex/index.bbl b/examples/latex/index.bbl
similarity index 100%
rename from example/latex/index.bbl
rename to examples/latex/index.bbl
diff --git a/example/latex/index.blg b/examples/latex/index.blg
similarity index 100%
rename from example/latex/index.blg
rename to examples/latex/index.blg
diff --git a/example/latex/index.log b/examples/latex/index.log
similarity index 100%
rename from example/latex/index.log
rename to examples/latex/index.log
diff --git a/example/latex/index.out b/examples/latex/index.out
similarity index 100%
rename from example/latex/index.out
rename to examples/latex/index.out
diff --git a/example/latex/index.pdf b/examples/latex/index.pdf
similarity index 100%
rename from example/latex/index.pdf
rename to examples/latex/index.pdf
diff --git a/example/latex/index.synctex.gz b/examples/latex/index.synctex.gz
similarity index 100%
rename from example/latex/index.synctex.gz
rename to examples/latex/index.synctex.gz
diff --git a/example/latex/index.tex b/examples/latex/index.tex
similarity index 100%
rename from example/latex/index.tex
rename to examples/latex/index.tex
diff --git a/example/latex/library.bib b/examples/latex/library.bib
similarity index 100%
rename from example/latex/library.bib
rename to examples/latex/library.bib
diff --git a/example/load_references.py b/examples/load_references.py
similarity index 93%
rename from example/load_references.py
rename to examples/load_references.py
index 9718dde..aad5a0f 100644
--- a/example/load_references.py
+++ b/examples/load_references.py
@@ -3,7 +3,7 @@ import os
def reference_example():
# Load references and insert them.
- from snipper.citations import get_bibtex, get_aux #!s=a
+ from snipper.load_citations import get_bibtex, get_aux #!s=a
bibfile = "latex/library.bib"
auxfile = 'latex/index.aux'
bibtex = get_bibtex(bibfile)
diff --git a/example/output/citations.py b/examples/output/citations.py
similarity index 100%
rename from example/output/citations.py
rename to examples/output/citations.py
diff --git a/example/output/load_references_a.py b/examples/output/load_references_a.py
similarity index 71%
rename from example/output/load_references_a.py
rename to examples/output/load_references_a.py
index 304c800..672cac2 100644
--- a/example/output/load_references_a.py
+++ b/examples/output/load_references_a.py
@@ -1,5 +1,5 @@
# load_references.py
- from snipper.citations import get_bibtex, get_aux
+ from snipper.load_citations import get_bibtex, get_aux
bibfile = "latex/library.bib"
auxfile = 'latex/index.aux'
bibtex = get_bibtex(bibfile)
diff --git a/example/output/load_references_b.py b/examples/output/load_references_b.py
similarity index 100%
rename from example/output/load_references_b.py
rename to examples/output/load_references_b.py
diff --git a/examples/process_cs101.py b/examples/process_cs101.py
new file mode 100644
index 0000000..0268b19
--- /dev/null
+++ b/examples/process_cs101.py
@@ -0,0 +1,25 @@
+def main():
+ from snipper.snip_dir import snip_dir
+ from snipper.load_citations import get_aux, get_bibtex
+ bibfile = get_bibtex('latex/library.bib')
+ auxfile = get_aux('latex/index.aux')
+
+ references = dict(bibtex=bibfile,
+ aux=auxfile,
+ commands=[
+ dict(command='\\aref2', output="(Assignment 2, \\ref{%s})", aux=auxfile),
+ dict(command='\\href', output="\cite[\\ref{%s}]{herlau}", aux=auxfile),
+ ]
+ )
+
+
+ output = snip_dir(source_dir="./cs101_instructorm", dest_dir="./cs101_students", output_dir="./cs101_output",
+ references=references,
+ )
+
+ a = 234
+
+
+
+if __name__ == "__main__":
+ main()
\ No newline at end of file
diff --git a/src/codesnipper.egg-info/PKG-INFO b/src/codesnipper.egg-info/PKG-INFO
index 487bc49..070de1a 100644
--- a/src/codesnipper.egg-info/PKG-INFO
+++ b/src/codesnipper.egg-info/PKG-INFO
@@ -1,11 +1,11 @@
Metadata-Version: 2.1
Name: codesnipper
-Version: 0.0.1
+Version: 0.0.2
Summary: A lightweight framework for censoring student solutions files and extracting code + output
Home-page: https://lab.compute.dtu.dk/tuhe/snipper
Author: Tue Herlau
Author-email: tuhe@dtu.dk
-License: UNKNOWN
+License: MIT
Project-URL: Bug Tracker, https://lab.compute.dtu.dk/tuhe/snipper/issues
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
@@ -15,8 +15,158 @@ Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
-# Snip
-A lightweight framework for removing code from student solutions. Currently used at DTU.
+# Snipper
+A lightweight framework for removing code from student solutions.
+## Installation
+```console
+pip install codesnipper
+```
+## What it does
+This project address the following three challenges for administering a python-based course
+ - You need to maintain a (working) version for debugging as well as a version handed out to students (with code missing)
+ - You ideally want to make references in source code to course material *"(see equation 2.1 in exercise 5)"* but these tend to go out of date
+ - You want to include code snippets and code output in lectures notes/exercises/beamer slides
+ - You want to automatically create student solutions
+This framework address these problems and allow you to maintain a **single**, working project repository.
+
+The project is currently used in **02465** at DTU. An example of student code can be found at:
+ - https://gitlab.gbar.dtu.dk/02465material/02465students/blob/master/irlc/ex02/dp.py
+
+A set of lectures notes where all code examples/output are automatically generated from the working repository can be found a
+- https://lab.compute.dtu.dk/tuhe/books (see **Sequential decision making**)
+
+## How it works
+The basic functionality is quite simple. You start with your working script in your private repository and add special tags to the script.
+In this case I have added the tags `#!b` (cut a block) and `#!f` (cut function scope).
+```python
+def myfun(): #!f The error I am going to raise
+ """ The function docstring will not be removed"""
+ print("This is a function")
+ return 42
+
+def a_long_function():
+ a = 234
+ print("a line")
+ print("a line") #!b
+ print("a line")
+ print("a line") #!b Insert three missing print statements.
+ print("a line")
+ return a
+
+if __name__ == "__main__":
+ myfun()
+```
+This will produce the following file:
+```python
+def myfun():
+ """ The function docstring will not be removed"""
+ # TODO: 2 lines missing.
+ raise NotImplementedError("The error I am going to raise")
+
+def a_long_function():
+ a = 234
+ print("a line")
+ # TODO: 3 lines missing.
+ raise NotImplementedError("Insert three missing print statements.")
+ print("a line")
+ return a
+
+if __name__ == "__main__":
+ myfun()
+```
+You can also use the framework to capture code snippets, outputs and interactive python output.
+To do this, save the following in `foo.py`
+```python
+def myfun(): #!s This snippet will be saved to foo.py in the output directory.
+ print("Hello") #!s
+
+print("Do not capture me")
+for i in range(4): #!o
+ print("Output", i)
+print("Goodbuy world") #!o
+print("don't capture me")
+
+# Interactive pythong example
+print("Hello World") #!i #!i # this is a single-line cutout.
+````
+These block-tags will create a file `foo.py` (in the output directory) containing
+```python
+def myfun():
+ print("Hello")
+```
+A file `foo.txt` containing the captured output
+```txt
+Output 0
+Output 1
+Output 2
+Output 3
+Goodbuy world
+```
+and a typeset version of an interactive python session in `foo.pyi` (use `pycon` in minted; this gitlab server appears not to support `pycon`)
+```pycon
+>>> print("hello world")
+Hello World"
+```
+All these files can be directly imported into `LaTeX` using e.g. `minted`: You never need to mix `LaTeX` code and python again!
+
+
+## References:
+Bibliography references can be loaded from `references.bib`-files and in-document references from the `.aux` file.
+For this example, we will insert references shown in the `examples/latex/index.tex`-document. To do so, we can use these tags:
+```python
+def myfun(): #!s
+ """
+ To solve this exercise, look at \ref{eq1} in \ref{sec1}.
+ You can also look at \cite{bertsekasII} and \cite{herlau}
+ More specifically, look at \cite[Equation 117]{bertsekasII} and \cite[\ref{fig1}]{herlau}
+
+ We can also write a special tag to reduce repetition: \nref{fig1} and \nref{sec1}.
+ """
+ return 42 #!s
+
+```
+We can manually compile this example by first loading the aux-files and the bibliographies as follows:
+```python
+# load_references.py
+ from snipper.citations import get_bibtex, get_aux
+ bibfile = "latex/library.bib"
+ auxfile = 'latex/index.aux'
+ bibtex = get_bibtex(bibfile)
+ aux = get_aux(auxfile)
+```
+Next, we load the python file containing the reference code and fix all references based on the aux and bibliography data.
+```python
+# load_references.py
+ file = "citations.py"
+ with open(file, 'r') as f:
+ lines = f.read().splitlines()
+ lines = fix_aux(lines, aux=aux)
+ lines = fix_aux_special(lines, aux=aux, command='\\nref', bibref='herlau')
+ lines = fix_bibtex(lines, bibtex=bibtex)
+ with open('output/citations.py', 'w') as f:
+ f.write("\n".join(lines))
+```
+The middle command is a convenience feature: It allows us to specify a special citation command `\nref{..}` which always compiles to `\cite[\ref{...}]{herlau}`. This is useful if e.g. `herlau` is the bibtex key for your lecture notes. The result is as follows:
+```python
+"""
+References:
+ [Ber07] Dimitri P. Bertsekas. Dynamic Programming and Optimal Control, Vol. II. Athena Scientific, 3rd edition, 2007. ISBN 1886529302.
+ [Her21] Tue Herlau. Sequential decision making. (See 02465_Notes.pdf), 2021.
+"""
+def myfun(): #!s
+ """
+ To solve this exercise, look at eq. (1) in Section 1.
+ You can also look at (Ber07) and (Her21)
+ More specifically, look at (Ber07, Equation 117) and (Her21, Figure 1)
+
+ We can also write a special tag to reduce repetition: (Her21, Figure 1) and (Her21, Section 1).
+ """
+ return 42 #!s
+```
+Note this example uses the low-level api. Normally you would just pass the bibtex and aux-file to the main censor-file command.
+
+## Additional features:
+- You can name tags using `#!s=bar` to get a `foo_bar.py` snippet. This is useful when you need to cut multiple sessions. This also works for the other tags.
diff --git a/src/codesnipper.egg-info/SOURCES.txt b/src/codesnipper.egg-info/SOURCES.txt
index 8b9ec96..0064f64 100644
--- a/src/codesnipper.egg-info/SOURCES.txt
+++ b/src/codesnipper.egg-info/SOURCES.txt
@@ -9,5 +9,8 @@ src/codesnipper.egg-info/dependency_links.txt
src/codesnipper.egg-info/requires.txt
src/codesnipper.egg-info/top_level.txt
src/snipper/__init__.py
+src/snipper/citations.py
+src/snipper/fix_cite.py
+src/snipper/fix_s.py
src/snipper/snip_dir.py
-src/snipper/snipper.py
\ No newline at end of file
+src/snipper/snipper_main.py
\ No newline at end of file
diff --git a/src/codesnipper.egg-info/requires.txt b/src/codesnipper.egg-info/requires.txt
index 7f7afbf..4ba7d8f 100644
--- a/src/codesnipper.egg-info/requires.txt
+++ b/src/codesnipper.egg-info/requires.txt
@@ -1 +1,3 @@
-jinja2
+pexpect
+wexpect
+pybtex
diff --git a/src/snipper/__pycache__/citations.cpython-38.pyc b/src/snipper/__pycache__/citations.cpython-38.pyc
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diff --git a/src/snipper/block_parsing.py b/src/snipper/block_parsing.py
new file mode 100644
index 0000000..0b1009c
--- /dev/null
+++ b/src/snipper/block_parsing.py
@@ -0,0 +1,78 @@
+def f2(lines, tag, i=0, j=0):
+ for k in range(i, len(lines)):
+ index = lines[k].find(tag, j if k == i else 0)
+ if index >= 0:
+ return k, index
+ return None, None
+
+
+def block_iterate(lines, tag):
+ contents = {'joined': lines}
+ while True:
+ contents = block_split(contents['joined'], tag)
+ if contents is None:
+ break
+
+ yield contents
+
+
+def block_split(lines, tag):
+ stag = tag[:2] # Start of any next tag.
+
+ def join(contents):
+ return contents['first'] + [contents['block'][0] + contents['post1']] + contents['block'][1:-1] \
+ + [contents['block'][-1] + contents['post2']] + contents['last']
+ contents = {}
+ i, j = f2(lines, tag)
+
+ def get_tag_args(line):
+ k = line.find(" ")
+ tag_args = (line[:k + 1] if k >= 0 else line)[len(tag):]
+ if len(tag_args) == 0:
+ return {'': ''} # No name.
+ tag_args = dict([t.split("=") for t in tag_args.split(";")])
+ return tag_args
+
+ if i is None:
+ return None
+ else:
+ start_tag_args = get_tag_args(lines[i][j:])
+ START_TAG = f"{tag}={start_tag_args['']}" if '' in start_tag_args else tag
+ END_TAG = START_TAG
+ i2, j2 = f2(lines, END_TAG, i=i, j=j+1)
+ if i2 == None:
+ END_TAG = tag
+ i2, j2 = f2(lines, END_TAG, i=i, j=j+1)
+ if i2 == None:
+ print("\n".join( lines[i:]))
+ raise Exception("Did not find matching tag", tag)
+
+
+ if i == i2:
+ # Splitting a single line. To reduce confusion, this will be treated slightly differently:
+ l2 = lines[:i] + [lines[i][:j2], lines[i][j2:]] + lines[i2+1:]
+ c2 = block_split(l2, tag=tag)
+ c2['block'].pop()
+ c2['joined'] = join(c2)
+ return c2
+ else:
+ contents['first'] = lines[:i]
+ contents['last'] = lines[i2+1:]
+
+ def argpost(line, j):
+ nx_tag = line.find(stag, j+1)
+ arg1 = line[j+len(tag):nx_tag]
+ if nx_tag >= 0:
+ post = line[nx_tag:]
+ else:
+ post = ''
+ return arg1, post
+
+ contents['arg1'], contents['post1'] = argpost(lines[i], j)
+ contents['arg2'], contents['post2'] = argpost(lines[i2], j2)
+ blk = [lines[i][:j]] + lines[i+1:i2] + [lines[i2][:j2]]
+ contents['block'] = blk
+ contents['joined'] = join(contents)
+ contents['start_tag_args'] = start_tag_args
+ contents['name'] = start_tag_args['']
+ return contents
\ No newline at end of file
diff --git a/src/snipper/fix_bf.py b/src/snipper/fix_bf.py
new file mode 100644
index 0000000..e69de29
diff --git a/src/snipper/fix_cite.py b/src/snipper/fix_cite.py
index 475e44d..7fbc1b4 100644
--- a/src/snipper/fix_cite.py
+++ b/src/snipper/fix_cite.py
@@ -1,34 +1,10 @@
-from snipper.citations import find_tex_cite
+from snipper.load_citations import find_tex_cite
from snipper.snipper_main import COMMENT
-def fix_references(lines, info, strict=True):
- for cmd in info['new_references']:
- lines = fix_single_reference(lines, cmd, info['new_references'][cmd], strict=strict)
- return lines
-def fix_single_reference(lines, cmd, aux, strict=True):
- references = aux
- s = "\n".join(lines)
- i = 0
- while True:
- (i, j), reference, txt = find_tex_cite(s, start=i, key=cmd)
- if i < 0:
- break
- if reference not in references:
- er = "cref label not found for label: " + reference
- if strict:
- raise IndexError(er)
- else:
- print(er)
- continue
- r = references[reference]
- rtxt = r['nicelabel']
- s = s[:i] + rtxt + s[j + 1:]
- i = i + len(rtxt)
- print(cmd, rtxt)
-
- lines = s.splitlines(keepends=False)
- return lines
+def fix_citations():
+ # This should be the master function.
+ pass
def fix_aux_special(lines, aux, command='\\nref', bibref='herlau'):
@@ -70,4 +46,35 @@ def fix_bibtex(lines, bibtex):
s = s[:i] + "References:\n" + "\n".join(all_refs) +"\n"+ s[i:]
# s = s.replace(cpr, info['code_copyright'])
- return s.splitlines()
\ No newline at end of file
+ return s.splitlines()
+
+
+
+def fix_references(lines, info, strict=True):
+ for cmd in info['new_references']:
+ lines = fix_single_reference(lines, cmd, info['new_references'][cmd], strict=strict)
+ return lines
+
+def fix_single_reference(lines, cmd, aux, strict=True):
+ references = aux
+ s = "\n".join(lines)
+ i = 0
+ while True:
+ (i, j), reference, txt = find_tex_cite(s, start=i, key=cmd)
+ if i < 0:
+ break
+ if reference not in references:
+ er = "cref label not found for label: " + reference
+ if strict:
+ raise IndexError(er)
+ else:
+ print(er)
+ continue
+ r = references[reference]
+ rtxt = r['nicelabel']
+ s = s[:i] + rtxt + s[j + 1:]
+ i = i + len(rtxt)
+ print(cmd, rtxt)
+
+ lines = s.splitlines(keepends=False)
+ return lines
\ No newline at end of file
diff --git a/src/snipper/fix_s.py b/src/snipper/fix_s.py
index 0eed3c8..b8f1d9b 100644
--- a/src/snipper/fix_s.py
+++ b/src/snipper/fix_s.py
@@ -1,79 +1,6 @@
-import functools
from collections import defaultdict
-from snipper.snipper_main import full_strip, block_process
-
-def f2(lines, tag, i=0, j=0):
- for k in range(i, len(lines)):
- index = lines[k].find(tag, j if k == i else 0)
- if index >= 0:
- return k, index
- return None, None
-
-def block_iterate(lines, tag):
- contents = {'joined': lines}
- while True:
- contents = block_split(contents['joined'], tag)
- if contents is None:
- break
-
- yield contents
-
-def block_split(lines, tag):
- stag = tag[:2] # Start of any next tag.
-
- def join(contents):
- return contents['first'] + [contents['block'][0] + contents['post1']] + contents['block'][1:-1] \
- + [contents['block'][-1] + contents['post2']] + contents['last']
- contents = {}
- i, j = f2(lines, tag)
-
- def get_tag_args(line):
- k = line.find(" ")
- tag_args = (line[:k + 1] if k >= 0 else line)[len(tag):]
- if len(tag_args) == 0:
- return {'': ''} # No name.
- tag_args = dict([t.split("=") for t in tag_args.split(";")])
- return tag_args
-
- if i is None:
- return None
- else:
- start_tag_args = get_tag_args(lines[i][j:])
- START_TAG = f"{tag}={start_tag_args['']}" if '' in start_tag_args else tag
- END_TAG = START_TAG
- i2, j2 = f2(lines, END_TAG, i=i, j=j+1)
- if i2 == None:
- END_TAG = tag
- i2, j2 = f2(lines, END_TAG, i=i, j=j+1)
-
- if i == i2:
- # Splitting a single line. To reduce confusion, this will be treated slightly differently:
- l2 = lines[:i] + [lines[i][:j2], lines[i][j2:]] + lines[i2+1:]
- c2 = block_split(l2, tag=tag)
- c2['block'].pop()
- c2['joined'] = join(c2)
- return c2
- else:
- contents['first'] = lines[:i]
- contents['last'] = lines[i2+1:]
-
- def argpost(line, j):
- nx_tag = line.find(stag, j+1)
- arg1 = line[j+len(tag):nx_tag]
- if nx_tag >= 0:
- post = line[nx_tag:]
- else:
- post = ''
- return arg1, post
-
- contents['arg1'], contents['post1'] = argpost(lines[i], j)
- contents['arg2'], contents['post2'] = argpost(lines[i2], j2)
- blk = [lines[i][:j]] + lines[i+1:i2] + [lines[i2][:j2]]
- contents['block'] = blk
- contents['joined'] = join(contents)
- contents['start_tag_args'] = start_tag_args
- contents['name'] = start_tag_args['']
- return contents
+import os
+from snipper.block_parsing import block_iterate
def get_s(lines):
@@ -86,8 +13,6 @@ def get_s(lines):
output[name] = [l for c in co for l in c['block']]
return output
-import os
-
def save_s(lines, output_dir, file_path): # save file snips to disk
content = get_s(lines)
if not os.path.isdir(output_dir):
@@ -99,30 +24,6 @@ def save_s(lines, output_dir, file_path): # save file snips to disk
with open(output_dir + "/" + os.path.basename(file_path)[:-3] + ("_" + name if len(name) > 0 else name) + ".py", 'w') as f:
f.write(out)
- # out = "\n".join([f"# {include_path_base}"] + ["\n".join(v[1]) for v in c if v[0] == outf])
- # with open(outf, 'w') as f:
- # f.write(out)
-
- # def block_fun(lines, start_extra, end_extra, art, output, **kwargs):
- # outf = output + ("_" + art if art is not None and len(art) > 0 else "") + ".py"
- # lines = full_strip(lines)
- # return lines, [outf, lines]
- # try:
- # a,b,c,_ = block_process(lines, tag="#!s", block_fun=functools.partial(block_fun, output=output))
- # if len(c)>0:
- # kvs= { v[0] for v in c}
- # for outf in kvs:
- # out = "\n".join([f"# {include_path_base}"] + ["\n".join(v[1]) for v in c if v[0] == outf] )
- # with open(outf, 'w') as f:
- # f.write(out)
- #
- # except Exception as e:
- # print("lines are")
- # print("\n".join(lines))
- # print("Bad thing in #!s command in file", file)
- # raise e
- # return lines
-
s1 = """
L1
L2 #!s=a
@@ -147,5 +48,3 @@ if __name__ == "__main__":
# contents = block_split(s1.splitlines(), tag="#!s")
# contents = block_split(contents['joined'], tag="#!s")
# lines2 = contents['first'] +
- a = 234
- pass
\ No newline at end of file
diff --git a/src/snipper/citations.py b/src/snipper/load_citations.py
similarity index 100%
rename from src/snipper/citations.py
rename to src/snipper/load_citations.py
diff --git a/src/snipper/snip_dir.py b/src/snipper/snip_dir.py
index 0a68a9d..15657af 100644
--- a/src/snipper/snip_dir.py
+++ b/src/snipper/snip_dir.py
@@ -5,7 +5,15 @@ import time
import fnmatch
-def snip_dir(source_dir, dest_dir, exclude=None, clean_destination_dir=True):
+def snip_dir(source_dir, # Sources
+ dest_dir, # Will write to this directory
+ output_dir=None, # Where snippets are going to be stored
+ references=None, # Reference database
+ exclude=None, clean_destination_dir=True):
+
+ if references == None:
+ references = dict(aux=None, bibtex=None, commands=[])
+
if exclude == None:
exclude = []
if not os.path.exists(dest_dir):
diff --git a/src/snipper/snipper_main.py b/src/snipper/snipper_main.py
index 1886033..dc6bbdc 100644
--- a/src/snipper/snipper_main.py
+++ b/src/snipper/snipper_main.py
@@ -315,7 +315,6 @@ def censor_code(lines, keep=True):
-
def censor_file(file, info, paths, run_files=True, run_out_dirs=None, cut_files=True, solution_list=None,
censor_files=True,
include_path_base=None,
--
GitLab