Update README.md

README.md

@@ -3,18 +3,19 @@
 This repository contains a curated list of Jupyter Notebooks suitable for serveral tasks related to QIM and Image analysis in general. 
 
 # Contribution
-The first cell of the notebook should follow the pattern:
 
+### Header
+
+The first cell of the notebook should follow the pattern:
 
 ```
 # Title of the notebook
 Notebook author: Author name (author@email.dk)
 
-
-Short description paragraph
+Short paragraph that describes the contents of the Notebook.
 
 ## Dependencies
-Explain how to install non-standard libraries that are needed for the notebook to run, or point to resources
+Explain how to install non-standard libraries that are needed for the notebook to run, or point to resources.
 
 ## Reference this work
 In case the main library used for the notebook is part of a publication, the reference should be inserted here.
@@ -25,3 +26,32 @@ The reference can be created using the Qim Platform API, that follows this patte
 `https://platform.qim.dk/qim-api/reference/<doi address>`
 
 For example, accessing the address https://platform.qim.dk/qim-api/reference/10.1109/CVPRW59228.2023.00456 will give you the markdown text for this particular DOI. It can then be easily copied and pasted into the jupyter notebook.
+
+### Location
+
+Notebooks should be placed according to their intended usage. New directories can be suggested, but the current structure is the following:
+
+```
+.
+├── analysis
+│   └── structure_orientation
+├── data
+├── detection
+├── reconstruction
+├── resources
+│   ├── img2d
+│   ├── img3d
+│   └── libs
+├── segmentation
+└── visualization
+
+```
+
+The `resources` directory should not contain Notebooks, but any data that is required for other Notebooks to run. 
+
+Small python libraries can be located in the `libs`directory. And they can be imported by adding the directory to the path:
+```
+import sys
+sys.path.append("../../resources/libs/")
+
+```