releases.md

Release History

Below, you'll find details about the version history of qim3d.

As the library is still in its early development stages, there may be breaking changes before v1.0 without prior deprecation warnings. Therefore, it's advisable to review the release history for more information if you encounter any issues.

And remember to keep your pip installation up to date so that you have the latest features!

v0.3.3 (coming soon!)

• Introduction of qim3d.viz.slicer (and also qim3d.viz.orthogonal )
• Introduction of qim3d.gui.annotation_tool
• Introduction of qim3d.processing.Blob for blob detection
• Introduction of qim3d.processing.local_thickness
• Introduction of qim3d.processing.structure_tensor
• Support for loading DICOM files with qim3d.io.load
• Introduction of qim3d.processing.get_3d_cc for 3D connected components and qim3d.viz.plot_cc for associated visualization
• Introduction of qim3d.viz.colormaps for easy visualization of e.g. multi-label segmentation results
• Introduction of qim3d.processing.operations.background_removal

v0.3.2 (23/02/2024)

This version focus on the increased usability of the qim3d library

• Online documentation available at https://platform.qim.dk/qim3d
• Virtual stacks also available for txm files
• Updated GUI launch pipeline
• New functionalities for qim3d.viz.slices
• Introduction of qim3d.processing.filters
• Introduction of qim3d.viz.vol

v0.3.1 (01/02/2024)

Release expanding the IO functionalities

• Support for loading vol nii and bigtiff files
• Data loader now supports virtual_stack
• Save functionality for all file formats except txm

v0.3.0 (23/01/2024)

• Introduction of qim3d CLI
• Introduction of memory utils
• Data Explorer GUI
• Save functionality for tif files

v0.2.0 (18/09/2023)

Includes new develoments toward the usability of the library, as well as its integration with the QIM platform.

• Refactored code for the graphical interfaces
  • For the local thicknes GUI, now it is possible to pass and receive numpy arrays instead of using the upload functionality.
• Improved data loader
  • Now the extensions tif, h5 and txm are supported.
• Added qim3d.viz.slices for easy slice visualization.
• U-net model creation
  • Model availabe from qim3d.models.UNet
  • Data augmentation class at qim3d.utils.Augmentation
  • Notebook with full pipeline at docs/notebooks/Unet.ipynb
• Image examples accessible from qim3d.examples

v0.1.3 (17/05/2023)

First stable release.

• Simple Tiff data loader
• Graphical interfaces
  • Local thickness
  • 3D Isosurfaces
  • Data exploration tool